Changes between Version 17 and Version 18 of SOP/CallingVariantsRNAseq


Ignore:
Timestamp:
08/16/17 12:32:41 (7 years ago)
Author:
krichard
Comment:

--

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  • SOP/CallingVariantsRNAseq

    v17 v18  
    2828To map:
    2929{{{
    30     ''''Run this command within the FirstPass directory''''
     30    '''Run this command within the FirstPass directory'''
    3131Input format: fastq ; output format: SAM
    3232bsub STAR --genomeDir /path/to/GenomeDir --readFilesIn /path/to/read1.fastq  --outFileNamePrefix whateverPrefix --runThreadN 8