Changes between Version 18 and Version 19 of SOP/CallingVariantsRNAseq


Ignore:
Timestamp:
08/16/17 12:33:10 (7 years ago)
Author:
krichard
Comment:

--

Legend:

Unmodified
Added
Removed
Modified

  • SOP/CallingVariantsRNAseq

    v18 v19  
    2727
    2828To map:
     29    '''Run this command within the FirstPass directory'''
    2930{{{
    30     '''Run this command within the FirstPass directory'''
    3131Input format: fastq ; output format: SAM
    3232bsub STAR --genomeDir /path/to/GenomeDir --readFilesIn /path/to/read1.fastq  --outFileNamePrefix whateverPrefix --runThreadN 8