Changes between Version 15 and Version 16 of SOP/PooledCRISPR


Ignore:
Timestamp:
12/07/20 15:47:13 (4 years ago)
Author:
byuan
Comment:

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  • SOP/PooledCRISPR

    v15 v16  
    115115  - .sgrna_summary.txt resuls by guide (for all guides); this file can be made into a matrix using a few UNIX commands, e.g.
    116116
    117 Run .Rmd to create a file (.summary.pdf) which summarizes (only) the top hits, and also includes a waterfall plot.
     117Run .Rmd to create a file (.html) which summarizes (only) the top hits, and also includes a waterfall plot. To create this summary report file, you can either open the .Rmd in Rstudio and click on "knit", or run the command below:
     118{{{
     119Rscript -e "rmarkdown::render('foo.report.Rmd')"
     120}}}
     121
    118122
    119123{{{