Changes between Version 26 and Version 27 of SOP/PooledCRISPR


Ignore:
Timestamp:
11/12/24 12:47:12 (2 months ago)
Author:
gbell
Comment:

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  • SOP/PooledCRISPR

    v26 v27  
    44== Method 1: MAGeCK ==
    55
    6 Analyze CRISPR genome-wide, or targeted, screen.  As input, MAGeCK requires (raw) counts.  If there are no replicates, MAGeCK will estimate the mean/variance from all the samples, i.e. both conditions.
     6Analyze a CRISPR genome-wide, or targeted, screen.  As input, MAGeCK requires (raw) counts.  If there are no replicates, MAGeCK will estimate the mean/variance from all the samples, i.e. both conditions.
    77
    88  * [[https://genomebiology.biomedcentral.com/articles/10.1186/s13059-014-0554-4 | Publication]]