Changes between Version 27 and Version 28 of SOP/PooledCRISPR

Timestamp:

11/12/24 12:52:43 (8 weeks ago)

Author:

gbell

Comment:

--

SOP/PooledCRISPR

@@ -36 +36 @@
 # Error in axis(1, at = 1:length(vali), labels = (collabel), las = 2) :
 #'at' and 'labels' lengths differ, 2 != 4
-# a workaround this is to edit the R script is to set the collabel to only two conditions,
+# a workaround this is to edit the R script is to set 'collabel' (column labels) to only two conditions,
 # e.g.  collabel=c("low","high")
 # in the R script for all occurrences
@@ -59 +59 @@
 
   - .gene_summary.txt results summarized by gene (for all genes)
-  - .sgrna_summary.txt resuls by guide (for all guides); this file can be made into a matrix using a few UNIX commands, e.g. 
+  - .sgrna_summary.txt results by guide (for all guides); this file can be made into a matrix using a few UNIX commands, e.g. 
 
 Run .Rmd to create a file (.html) which summarizes (only) the top hits, and also includes a waterfall plot. To create this summary report file, you can either open the .Rmd in Rstudio and click on "knit", or run the command below: