Changes between Version 1 and Version 2 of SOP/scRNA-seq/Slingshot


Ignore:
Timestamp:
10/13/20 13:25:30 (4 years ago)
Author:
byuan
Comment:

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  • SOP/scRNA-seq/Slingshot

    v1 v2  
    22== Making diffusion maps with Slingshot ==
    33
    4 You can either assigned cells to clusters based on [https://bioconductor.org/packages/release/bioc/vignettes/slingshot/inst/doc/vignette.html | Slingshot protocol ] or make a single cell object, i.e. from the Seurat object. Example commands for convert to single cell object from Seurat.
     4You can either assigned cells to clusters based on [https://bioconductor.org/packages/release/bioc/vignettes/slingshot/inst/doc/vignette.html | Slingshot protocol ] or make a single cell object, i.e. from the Seurat object.
     5
     6Example commands for convert to single cell object from Seurat.
    57 
    68  * **Making a single cell object from a Seurat object**