Changes between Version 45 and Version 46 of SOP/scRNA-seq

Timestamp:

05/05/21 09:28:39 (4 years ago)

Author:

twhitfie

Comment:

--

SOP/scRNA-seq

@@ -224 +224 @@
 # cluster/cell type from a single cell RNA-seq data-set.  The counts matrix
 # is the starting point.  From a Seurat object clusterCells, it can be extracted as follows:
-allgenesCT<-t(as.data.frame(clusterCells@assays$RNA@counts)) # Un-normalized
+allgenesCT<-t(as.data.frame(clusterCells@assays$RNA@counts)) # Un-normalized counts.
 allgenesCT<-as.data.frame(allgenesCT)
 ngenes<-ncol(allgenesCT)