Changes between Version 46 and Version 47 of SOP/scRNA-seq


Ignore:
Timestamp:
05/05/21 09:30:46 (4 years ago)
Author:
twhitfie
Comment:

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  • SOP/scRNA-seq

    v46 v47  
    233233allgenesCT<-allgenesCT[,c(ngenes+3,ngenes+2,ngenes+1,1:ngenes)]
    234234genecountsRaw<-as.matrix(t(allgenesCT[,c(-1,-2,-3)]))
    235 genecounts<-log2(genecountsRaw + 1) # Normalization with pseudocount.
     235genecounts<-log2(genecountsRaw + 1) # Logarithmic (base 2) transformation with pseudocount.
    236236coldata<-allgenesCT[,1:3]
    237237coldata$Sample<-as.factor(coldata$Sample)