Changes between Version 51 and Version 52 of SOP/scRNA-seq


Ignore:
Timestamp:
05/04/22 10:37:58 (3 years ago)
Author:
gbell
Comment:

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  • SOP/scRNA-seq

    v51 v52  
    396396  * Move the cbBuild output to a web server, which creates a page that looks something like https://cells.ucsc.edu/
    397397
     398=== 10x Genomics' Loupe Browser ===
     399
     400The [https://www.10xgenomics.com/products/loupe-browser Loupe Browser] is a nice tool for exploring and visualizing single-cell RNA-seq experiments.  The cloupe file format that the Loupe Browser requires is typically created by the 10x Genomics program, [https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/what-is-cell-ranger Cell Ranger]. 
     401
     402We recommend the Loupe Browser for exploration and visualization but not analysis or re-analysis.
     403
    398404=== Links to recommended scRNA-seq analysis tutorials and resources  ===
    399405