Changes between Version 53 and Version 54 of SOP/scRNA-seq


Ignore:
Timestamp:
12/05/23 15:21:52 (14 months ago)
Author:
ibarrasa
Comment:

--

Legend:

Unmodified
Added
Removed
Modified

  • SOP/scRNA-seq

    v53 v54  
    402402We recommend the Loupe Browser for exploration and visualization but not analysis or re-analysis.
    403403
     404=== Cell type classification  ===
     405Several methods for cell-type classification have been published. A good place to start is to try:
     406  * [https://powellgenomicslab.github.io/scPred/articles/introduction.html scPred]
     407  * singleR
     408This review [https://www.sciencedirect.com/science/article/pii/S2001037021004499#f0025 article] evaluates thirty-two published automatic methods for cell-type identification using scRNA-seq data. 
     409
    404410=== Links to recommended scRNA-seq analysis tutorials and resources  ===
    405411