Changes between Version 4 and Version 5 of SOPs/AssemblingRNAseqReads


Ignore:
Timestamp:
10/30/17 14:13:52 (7 years ago)
Author:
thiruvil
Comment:

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  • SOPs/AssemblingRNAseqReads

    v4 v5  
    6060* [http://www.broadinstitute.org/software/scripture/ Scripture]
    6161* [https://github.com/trinityrnaseq/trinityrnaseq/wiki Trinity] - includes inchworm together with other methods
     62* [https://ccb.jhu.edu/software/stringtie/index.shtml StringTie] - alternative to CuffLinks (from the same group/lab)
     63
    6264See the [https://www.synapse.org/Portal.html#!Synapse:syn2817724/wiki/70952 DREAM Alternative Splicing Challenge] for bake-off description and results
    6365