Changes between Version 24 and Version 25 of SOPs/InProgress


Ignore:
Timestamp:
05/14/14 13:03:03 (11 years ago)
Author:
gbell
Comment:

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  • SOPs/InProgress

    v24 v25  
    55=== Run macs2 (macs version 2, not version 1) to call ChIP-seq peaks. ===
    66
    7 The IDR analysis requires that you call lots of peaks, including all "good" ones and some that are just noise.
     7The IDR analysis requires that you call lots of peaks, including all "good" ones (signal) and some bad ones (noise).
    88
    99Adjust the fragment length with --nomodel --shiftsize if NSC/RSC plots are not good.