Changes between Version 21 and Version 22 of SOPs/atac_Seq


Ignore:
Timestamp:
09/29/20 13:49:02 (4 years ago)
Author:
byuan
Comment:

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  • SOPs/atac_Seq

    v21 v22  
    1010 * [#QC Run quality control and calculate QC metrics]
    1111 * [#call_peaks Call ATAC-seq "peaks"] with a high coverage of mapped reads
    12  * Analyze peak regions for binding motifs
     12 * [#Analyze peak regions for binding motifs]
    1313 * Identify differentially accessible regions (for multiple-sample experiments)
    1414 * Identify potential targets of peak regions and/or differentially accessible regions
    … …  
    119119}}}
    120120
    121 === Motifs analysis ===
     121=== [=#Analyze peak regions for binding motifs] ===
    122122
    123123Search motifs with [[http://homer.ucsd.edu/homer/ngs/peakMotifs.html | homer findMotifsGenome.pl]]