Changes between Version 46 and Version 47 of SOPs/atac_Seq

Timestamp:

06/01/21 13:30:16 (4 years ago)

Author:

byuan

Comment:

--

SOPs/atac_Seq

@@ -130 +130 @@
 MACS v2 is applicable for ATAC-Seq using the appropriate options/parameters. 
 
-MACS2 [[ https://github.com/alexyfyf/atac_nf/blob/7f996b7de0e349c5a10dbbd75b2c266339517a3b/atac.nf#L341|commands used in ATAC-seq review paper ]] : [[https://genomebiology.biomedcentral.com/articles/10.1186/s13059-020-1929-3 | From reads to insight: a hitchhiker’s guide to ATAC-seq data analysis]]
+MACS2 [[ https://github.com/alexyfyf/atac_nf/blob/7f996b7de0e349c5a10dbbd75b2c266339517a3b/atac.nf#L341|commands used in ATAC-seq review paper ]]  [[https://genomebiology.biomedcentral.com/articles/10.1186/s13059-020-1929-3 | From reads to insight: a hitchhiker’s guide to ATAC-seq data analysis]]
 {{{
     # convert bam to bed