Changes between Version 60 and Version 61 of SOPs/atac_Seq


Ignore:
Timestamp:
06/15/21 12:42:37 (4 years ago)
Author:
byuan
Comment:

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  • SOPs/atac_Seq

    v60 v61  
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    176      * If you are working with other species or don't have replicates, you can run macs2 with pair-end bed as an input. It considers ends of both mates, focus on cutting/insertion sites enrichment in ATAC-seq. ( https://twitter.com/XiChenUoM/status/1336658454866325506 )
     176     * If you are working with other species or don't have replicates, you can run macs2 with pair-end bed as an input. It considers ends of both mates, focus on [[https://twitter.com/XiChenUoM/status/1336658454866325506|cutting/insertion sites enrichment in ATAC-seq]].
    177177{{{
    178178    # convert bam to bed