Changes between Version 88 and Version 89 of SOPs/atac_Seq


Ignore:
Timestamp:
07/12/21 09:09:31 (4 years ago)
Author:
byuan
Comment:

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  • SOPs/atac_Seq

    v88 v89  
    206206{{{
    207207# Using a 'narrowPeak' file listing MACS2 peaks
    208 ./calculate_FRiP_score.py SampleA.bam SampleA_peaks.narrowPeak
     208./calculate_FRiP_score.py Sample.bam Sample_peaks.narrowPeak > Sample_FRiP_score.txt
    209209# Using a BED file of peaks
    210 ./calculate_FRiP_score.py SampleA.bam SampleA_peaks.bed
     210./calculate_FRiP_score.py Sample.bam Sample_peaks.bed > Sample_FRiP_score.txt
    211211}}}
    212212