Changes between Version 91 and Version 92 of SOPs/atac_Seq


Ignore:
Timestamp:
08/19/21 16:08:07 (3 years ago)
Author:
thiruvil
Comment:

--

Legend:

Unmodified
Added
Removed
Modified
  • SOPs/atac_Seq

    v91 v92  
    130130          * mm9: /nfs/BaRC_datasets/ENCODE_ATAC-seq_Pipeline/mm9/mm9.tsv
    131131          * mm10: /nfs/BaRC_datasets/ENCODE_ATAC-seq_Pipeline/mm10/mm10.tsv
    132        * Before running ENCODE pipeline, verify there is no preexisting conda startup code with the command below:
    133 {{{
    134 conda env list
    135 }}}
    136       You have no preexisting conda if you get "conda: command not found". Otherwise, log out, log back in, start the new conda instance, and activate encode-atac-seq-pipeline
     132      * Before running ENCODE pipeline, verify there is no preexisting      conda startup code with the command below:
     133{{{
     134        conda env list
     135}}}
     136       You have no preexisting conda if you get "conda: command not found". Otherwise, log out, log back in, start the new conda instance, and activate encode-atac-seq-pipeline
    137137      * Ignore the developer's instructions, use your home directory for conda and the pipeline.
    138138{{{