Changes between Version 17 and Version 18 of SOPs/chip_seq_peaks


Ignore:
Timestamp:
03/25/15 16:55:23 (10 years ago)
Author:
ibarrasa
Comment:

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  • SOPs/chip_seq_peaks

    v17 v18  
    4949
    5050==== MACS14 ====
    51 We now recommend using macs2. Macs2 is more effective at peak binding especially for broad peaks. Below is our previous recommendations on how to use macs1.4
     51We now recommend using macs2. Macs2 is more effective at peak finding especially for broad peaks. If you still want to use macs1.4, below are our previous recommendations on how to use it.
    5252  * For MACS to work the header of the sequences can have no spaces.
    5353  * The command 'macs' points to macs14 on WIBR local machines