Changes between Version 53 and Version 54 of SOPs/chip_seq_peaks


Ignore:
Timestamp:
08/06/20 10:50:46 (5 years ago)
Author:
byuan
Comment:

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  • SOPs/chip_seq_peaks

    v53 v54  
    77 * Note that quality control is important after read mapping and after peak calling.  The ENCODE consortium recommends some [[https://genome.ucsc.edu/ENCODE/qualityMetrics.html|quality metrics]].
    88
    9 * [[http://barc.wi.mit.edu/education/hot_topics/ChIPseq_2018/ChIPseq_2018.commands.txt|Basic commands can be found in our Hot Topics workshop]]. You need to change it based on your experiment as mentioned below.
     9* [[http://barc.wi.mit.edu/education/hot_topics/ChIPseq_2018/ChIPseq_2018.commands.txt| A simple pipeline can be found in our Hot Topics workshop]]. You need to change it based on your experiment as mentioned below.
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    1111=== Reviews ===