Changes between Version 81 and Version 82 of SOPs/chip_seq_peaks


Ignore:
Timestamp:
08/01/23 09:30:29 (10 months ago)
Author:
gbell
Comment:

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  • SOPs/chip_seq_peaks

    v81 v82  
    5454BaRC performed a [[chipSeqAnalysisPackages|ChIP-Seq bake off]] in the summer of 2011, with these [[chipSeqBakeOff|ChIP-Seq bake off results]].
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    56 Based on our ChIP-Seq bake off and on a published review ([[http://www.plosone.org/article/info:doi/10.1371/journal.pone.0011471|Evaluation of ChIP-Seq performance]]), MACs and SISSRs are good programs to try.
     56Based on our ChIP-Seq bake off and on a published review ([[http://www.plosone.org/article/info:doi/10.1371/journal.pone.0011471|Evaluation of ChIP-Seq performance]]), MACS2 is the peak-calling program we typically use.
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