Changes between Version 1 and Version 2 of SOPs/clusteringMatrixHeatmap
- Timestamp:
- 11/12/15 13:41:31 (9 years ago)
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SOPs/clusteringMatrixHeatmap
v1 v2 33 33 * Once you have the look you like, go to Export to create a high-resolution image (Export to Postscript), low resolution image (Export to Image), and/or a color bar. 34 34 35 * A heatmap can also be created on the command line. See the [http://jtreeview.sourceforge.net/docs/JTVUserManual/ch02.html#id1580676|Java TreeView manual] for all options, but a sample command is 35 36 37 {{{ 38 java -jar TreeView.jar -r my_genes_clustered.cdt -x Dendrogram -- -s 10x10 -a 0 -o my_genes_heatmap.png 39 }}} 40