Changes between Version 9 and Version 10 of SOPs/go_annotation


Ignore:
Timestamp:
09/28/18 14:29:53 (7 years ago)
Author:
thiruvil
Comment:

--

Legend:

Unmodified
Added
Removed
Modified

  • SOPs/go_annotation

    v9 v10  
    4141  [[http://software.broadinstitute.org/webservices/gpModuleRepository/download/prod/module/?file=/ssGSEAProjection/broad.mit.edu:cancer.software.genepattern.module.analysis/00270/7.6/ssGSEAProjection.zip | Broad's ssGSEA from GenePattern R/jar scripts]]
    4242
     43  * NOTE: GSEA should be run on the entire dataset, and not a subset of genes as this may bias the results. See [[https://groups.google.com/forum/#!searchin/gsea-help/subset%7Csort:date/gsea-help/INJ1RpLOBWk/1qwnsMOYAQAJ | GSEA pre-ranked questions (Google Groups)]]
     44
    4345=== BiNGO ===
    4446[[http://chianti.ucsd.edu/cyto_web/plugins/displayplugininfo.php?name=BiNGO|BiNGO Plugin]] \\