Changes between Version 14 and Version 15 of SOPs/go_annotation


Ignore:
Timestamp:
09/28/20 10:26:50 (4 years ago)
Author:
ibarrasa
Comment:

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  • SOPs/go_annotation

    v14 v15  
    2727     * 1. Upload your ranked file "file.rnk". Click on "Steps in GSEA analysis -> Load data" 
    2828     * 2. Click on  "Tools -> GseaPreranked" 
    29      * 3. Select one of the gene sets from the "Gene sets database". We recommend starting with the Hallmarks set (h.all). You can find more information about the sets [[https://www.gsea-msigdb.org/gsea/msigdb/index.jsp|here ]].
    30      * 4. Click on  "Tools -> GseaPreranked" 
     29     * 3. Select one of the gene sets from the "Gene sets database". We recommend starting with the Hallmarks set (h.all). You can find more information about the sets [[https://www.gsea-msigdb.org/gsea/msigdb/index.jsp|here ]]
     30     * 4. Select your uploaded ranked list and click the run button. 
    3131   3. To run the same type of analysis on the command line, use a command like
    3232{{{