Changes between Version 21 and Version 22 of SOPs/mapping
- Timestamp:
- 07/31/15 08:43:36 (9 years ago)
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SOPs/mapping
v21 v22 60 60 Bwa is a software package containing several related algorithms using the Burrows-Wheeler Transform. It works well even with indels, but not with spliced (RNA) reads. 61 61 62 Sample commands for short ( <=100 nt) reads:62 Sample commands for short (upto 100 bp) reads: 63 63 {{{ 64 64 # Align single-end reads … … 71 71 }}} 72 72 73 Sample commands for long (70 nt - 1M nt) reads:73 Sample commands for long (70bp or longer) reads: 74 74 {{{ 75 75 # Align single-end reads