Changes between Version 32 and Version 33 of SOPs/mapping


Ignore:
Timestamp:
08/04/16 09:33:54 (9 years ago)
Author:
yhuang
Comment:

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  • SOPs/mapping

    v32 v33  
    186186}}}
    187187
    188 The parameters included in the sample command are:
     188The parameters included in the above sample commands are:
    189189  * '''--runMode <alignReads, genomeGenerate>'''   "alignReads" does the actual mapping. "genomeGenerate" generates the genomeDir required for mapping (default = alignReads).
    190190  * '''--genomeDir </path/to/GenomeDir>'''  Specifies the path to the directory used for storing the genome information created in the genomeGenerate step.