Changes between Version 15 and Version 16 of SOPs/miningSAMBAM


Ignore:
Timestamp:
06/03/14 12:09:55 (11 years ago)
Author:
thiruvil
Comment:

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Legend:

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  • SOPs/miningSAMBAM

    v15 v16  
    9292unset DISPLAY  #needed for submitting to cluster
    9393bsub "qualimap bamqc -bam myFile.bam -outdir output_qualimap"
     94#rnaseq qc
     95bsub "qualimap rnaseq -bam myFile.bam -gtf Homo_sapiens.GRCh37.72.canonical.gtf -outdir output_qualimap_rnaseq -protocol non-strand-specific"
    9496}}}
    9597