Changes between Version 47 and Version 48 of SOPs/miningSAMBAM


Ignore:
Timestamp:
10/23/20 13:11:19 (4 years ago)
Author:
gbell
Comment:

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  • SOPs/miningSAMBAM

    v47 v48  
    230230
    231231{{{
    232 qualimap bamqc -bam Mapped_DNA_reads.bam -outdir qualimap_output
     232qualimap bamqc -bam Mapped_DNA_reads.bam -outdir qualimap_output -outformat PDF:HTML
    233233# Command-line execution may require disabling X-windows
    234 bsub "unset DISPLAY; qualimap bamqc -bam Mapped_DNA_reads.bam -outdir qualimap_output"
     234bsub "unset DISPLAY; qualimap bamqc -bam Mapped_DNA_reads.bam -outdir qualimap_output -outformat PDF:HTML"
    235235}}}
    236236