Changes between Version 50 and Version 51 of SOPs/miningSAMBAM


Ignore:
Timestamp:
10/13/23 10:07:27 (15 months ago)
Author:
gbell
Comment:

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  • SOPs/miningSAMBAM

    v50 v51  
    216216}}}
    217217
     218=== Convert BAM to bigwig format ===
     219
     220This can also be helpful for genome browser viewing.  Bigwig files are smaller than BED files.
     221
     222{{{
     223# Use bamCoverage from the deepTools suite
     224bamCoverage -b Mapped_reads.bam -o Mapped_reads.bw
     225}}}
     226
    218227=== Convert BAM back to fastq format ===
    219228