Changes between Version 7 and Version 8 of SOPs/miningSAMBAM


Ignore:
Timestamp:
02/03/14 11:45:36 (11 years ago)
Author:
byuan
Comment:

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  • SOPs/miningSAMBAM

    v7 v8  
    7878}}}
    7979
     80=== View alignment with samtools ===
     81
     82{{{
     83-e: change identical bases to '='
     84samtools view -b accepted_hits.bam |samtools fillmd -e - /nfs/genomes/mouse_mm10_dec_11_no_random/fasta_whole_genome/mm10.fa|more
     85}}}