Changes between Version 2 and Version 3 of SOPs/rna-seq-diff-expressions

Timestamp:

03/06/13 09:56:42 (12 years ago)

Author:

gbell

Comment:

--

SOPs/rna-seq-diff-expressions

@@ -1 +1 @@
 == Using RNA-Seq to quantify gene levels and assay for differential expression ==
+
+=== Basic approach ===
+
+    * For each sample, map reads to genome using splice-aware mapper.
+    * Count reads mapped to each gene (or other set of features).
+    * Use gene counts to identify differentially expressed genes.
+
 === General suggestions ===
   * **Preliminary issues**