Changes between Version 17 and Version 18 of SOPs/variant_calling_GATK


Ignore:
Timestamp:
12/16/15 11:35:23 (9 years ago)
Author:
gbell
Comment:

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  • SOPs/variant_calling_GATK

    v17 v18  
     1=== Which mapper and variant caller works best? ===
     2
     3No simple answer, but see
     4* [http://www.ncbi.nlm.nih.gov/pubmed/26639839 Hwang at al., 2015. Systematic comparison of variant calling pipelines using gold standard personal exome variants.]
    15
    26== Using GATK to call variants from short-read sequencing ==