Changes between Version 9 and Version 10 of SOPs/vcf


Ignore:
Timestamp:
10/17/13 14:46:29 (11 years ago)
Author:
gbell
Comment:

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  • SOPs/vcf

    v9 v10  
    6363||'''Tag''' || '''Description''' || '''More details''' ||
    6464|| GT || Genotype || ||
    65 || GQ || Genotype Quality || ||
     65|| GQ || Genotype Quality || -10*log,,10,,prob(genotype call is wrong, conditioned on the site's being variant) [so bigger is more confident]||
    6666|| GL || Likelihoods for RR,RA,AA genotypes (R=ref,A=alt) || ||
    6767|| DP || Number of high-quality bases || ||