Changes between Version 48 and Version 49 of SOPs/qc_shortReads


Ignore:
Timestamp:
02/20/19 15:02:15 (6 years ago)
Author:
thiruvil
Comment:

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  • SOPs/qc_shortReads

    v48 v49  
    218218}}}
    219219
    220 If you get an error like "Invalid quality score value", your fastq file probably has Sanger (offset 33) instead of Illumina (ASCII offset 64) quality scores. 
     220If you get an error like "Invalid quality score value" or segmentation fault, your fastq file probably has Sanger (offset 33) instead of Illumina (ASCII offset 64) quality scores.
    221221You'll need to add the option "-Q33" to your FASTX Toolkit arguments.
    222222